Sunday, November 8, 2009

Draft genome of Lumbricus rubellus

這篇文章在Nature有專文介紹 (詳見摘要之後)。據說今年 (2009)我們會看到Lumbricus rubellus的draft genome,而如今就快年底了。其實就算拖到明年也沒關係啦! 這是件令人興奮的大代誌呢! 請大家拭目以待吧!

[This is a very good review. Let's look forward to the draft genome of Lumbricus rubellus!!]

Earthworm genomes, genes and proteins: the (re)discovery of Darwin’s worms

Journal
Proc. R. Soc. B (2009) 276, 789–797
Authors
S. R. Stürzenbaum, J. Andre, P. Kille, A. J. Morgan
Abstract
Small incremental biological change, winnowed by natural selection over geological time scales to produce large consequences, was Darwin’s singular insight that revolutionized the life sciences. His publications after 1859, including the ‘earthworm book’, were all written to amplify and support the evolutionary theory presented in the Origin. Darwin was unable to provide a physical basis for the inheritance of favoured traits because of the absence of genetic knowledge that much later led to the ‘modern synthesis’. Mistaken though he was in advocating systemic ‘gemmules’ as agents of inheritance, Darwin was perceptive in seeking to underpin his core vision with concrete factors that both determine the nature of a trait in one generation and convey it to subsequent generations. This brief review evaluates the molecular genetic literature on earthworms published during the last decade, and casts light on the specific aspects of earthworm evolutionary biology that more or less engaged Darwin: (i) biogeography, (ii) species diversity, (iii) local adaptations and (iv) sensitivity. We predict that the current understanding will deepen with the announcement of a draft earthworm genome in Darwin’s bicentenary year, 2009. Subsequently, the earthworm may be elevated from the status of a soil sentinel to that elusive entity, an ecologically relevant genetic model organism.

News about this article in Nature
The year of the worm?   doi:10.1038/news.2008.1309
(first paragraph only)

The earthworm is finally inching its way into the genomic age.
Interest in the humble earthworm seems to have seen a revival of late. Stephen Stürzenbaum from Kings College London and his team are hoping to unveil its draft genome next year, and Stürzenbaum tells Nature News why he has written a review on the topic for Proceedings of the Royal Society B.